Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
APPSCQTVTTQLAPCLSYIQNRVKGGGNPSVPCCTGINNIYELAKTKEDRVAICNCLKNAFIHAGNVNPTLVAELPKKCGISFNMPPIDKNYDCNT
M038 Chain:A ((2-96))
APPSCQTVTTQLAPCLSYIQNRVKGGGNPSVPCCTGINNIYELAKTKEDRVAICNCLKNAFIHAGNVNPTLVAELPKKCGISFNMPPIDKNYDCNT
General information:
TITO was launched using:
RESULT:
Template:
M038.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 23387 for 718 contacts (32.6/contact) +
2D Compatibility (PS) -9642 + (NN) -4094 + (LL) 0
1D Compatibility (HY) 6800 + (ID) 400
Total energy: 16051.0 ( 22.36 by residue)
QMean score : -0.023
(partial model without unconserved sides chains):
PDB file :
Tito_M038.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M038-query.scw
PDB file :
Tito_Scwrl_M038.pdb
: