Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQPSCAAQLT----QLAPCARVGVAPAPGQPLPAPP----AECCSALGAVSHDCACGTLDIINSL----------------------------------PAKCGLPRVT----CH----
1BEA Chain:? ((5-120))
---SCVPGWAIPHNPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADIPAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATISGVAECPWILG
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31810 for 386 contacts (-82.4/contact) +
2D Compatibility (PS) -6774 + (NN) -4887 + (LL) 100
1D Compatibility (HY) -6000 + (ID) 850
Total energy: -50221.0 ( -130.11 by residue)
QMean score : 0.474
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: