Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGKTTTPDKEAFK---LA----PC---ASAAQDENASVSSQCCAKVKRI-EQNPACLCAVM------LSNTAKSSGID--PEIAMTIP-KRCNI--ADRPVGYKCGAYTLP---------
1A8L Chain:? ((1-119))
---MGLISDADKKVIKEEFFSKMVNPVKLIVFVRKD-HCQYCDQLKQLVQELSELTDKLSYEIVDFDTPEGKELAKRYRIDRAPATTITQDGKDFGVRYFGLPAGHEFAAFLEDIVDVSREET
General information:
TITO was launched using:
RESULT:
Template:
1A8L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6205 for 491 contacts (-12.6/contact) +
2D Compatibility (PS) -9206 + (NN) 409 + (LL) 180
1D Compatibility (HY) -4000 + (ID) 950
Total energy: -19772.0 ( -40.27 by residue)
QMean score : 0.361
(partial model without unconserved sides chains):
PDB file :
Tito_1A8L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1A8L-query.scw
PDB file :
Tito_Scwrl_1A8L.pdb
: