Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | AGE---CGKTPIRSAAASLSPCLGA-------AGNARAAVPPACCSKVTALIKTAPKCLCAVL-------LSPLAKQAGIK---------PG----IAITIPKRC------SIKNRQAGKKCGKYTLP---------------------------------------------------------------------------- |
1PII Chain:? ((255-452)) | -GENKVCGLTRGQDAKAAYD--AGAIYGGLIFVATSPRCVN---VEQAQEVMAAAPLQYVGVFRNHDIADVVDKAKVLSLAAVQLHGNEEQLYIDTLREALPAHVAIWKALSVGETLPAREFQHVDKYVLDNGQGGSGQRFDWSLLNGQSLGNVLLAGGLGADNCVEAAQTGCAGLDFNSAVESQPGIKDARLLASVFQTLRAY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PII.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -26888 for 434 contacts (-62.0/contact) +
2D Compatibility (PS) -9190 + (NN) -3844 + (LL) 120
1D Compatibility (HY) -4400 + (ID) 850
Total energy: -45052.0 ( -103.81 by residue)
QMean score : 0.441
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