Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVPCNTVDAKAAACVGFATGKAT---K---PSAECCTGLQQLAQTVKSVDDKKAICRCLKAAAKSL----GI----------QDKFLSKIPQACNINVGFPVSINTNCETIH
1HSS Chain:A ((16-103))
---------ALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI--------SEWCRCGALYSMLDSMYKEH--GAFPRCRREVVKLTAASITAVCRLPI--------------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35614 for 403 contacts (-88.4/contact) +
2D Compatibility (PS) -6003 + (NN) -3631 + (LL) 1716
1D Compatibility (HY) -3200 + (ID) 500
Total energy: -47232.0 ( -117.20 by residue)
QMean score : 0.409
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: