Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----DVNQDKTECANQLVGLASCLPYVG---GQSKTPT---IDCCSGLKQVLDKSRKCLCVLIK---DRDDPSLGLKIN------ATLAATLPSTCHAPVNMTECI---------------
1HSS Chain:A ((5-124))
MCYPGQAFQVP-------ALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI---SEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33498 for 442 contacts (-75.8/contact) +
2D Compatibility (PS) -7773 + (NN) -1809 + (LL) 876
1D Compatibility (HY) -1200 + (ID) 900
Total energy: -44304.0 ( -100.24 by residue)
QMean score : 0.426
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: