Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DSDQDKEECTQQLV---ALATCLPYVG----GDAK-A--------PTPDCCSGLKQVLNNNKKCLCVIIKDRNDP------DL-G---LNINVTLALALPSVCNAPANVSKCPG
2LVF Chain:A ((4-106))
----AQEECREQMQRQQMLSHCRMYMRQQMEESTYQTMPRRGMEPHMSECCEQLEGM---DESCRCEGLRMMMRMMQQKEMQPRGEQMRRM-MRLAENIPSRCNLS--PMRCP-
General information:
TITO was launched using:
RESULT:
Template:
2LVF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31269 for 450 contacts (-69.5/contact) +
2D Compatibility (PS) -7708 + (NN) -382 + (LL) -232
1D Compatibility (HY) -3600 + (ID) 1050
Total energy: -44241.0 ( -98.31 by residue)
QMean score : 0.349
(partial model without unconserved sides chains):
PDB file :
Tito_2LVF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LVF-query.scw
PDB file :
Tito_Scwrl_2LVF.pdb
: