Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QDCNGLVTTVISQCSGSYGNGSPPS---------AGCCRAARAVSNGCLCPKVTPQIAAAVNKQRIQAMASACNRPLPRTCGALQF
1FCD Chain:C ((1-80))
EPTAEMLTNNCAGCHGTHGNSVGPASPSIAQMDPMVFVEVMEGFKSGEIASTIMGRIAKGYSTADFEKMAGYFKQQTYQP------
General information:
TITO was launched using:
RESULT:
Template:
1FCD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19245 for 421 contacts (-45.7/contact) +
2D Compatibility (PS) -7885 + (NN) -7589 + (LL) 456
1D Compatibility (HY) -3200 + (ID) 550
Total energy: -38013.0 ( -90.29 by residue)
QMean score : 0.277
(partial model without unconserved sides chains):
PDB file :
Tito_1FCD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FCD-query.scw
PDB file :
Tito_Scwrl_1FCD.pdb
: