Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---AGECGNASPDTEAWKLAPCAAAAQNEKAAPSKSCCLQVKKIGQNPDCLCAVMLS------------NTAKSSGI-PEVAVTIPKRCNLADRPVGYKCGAYTLP-------------
1PP7 Chain:U ((5-118))
DLEASFTSRLPPEIVAALKR---KSSRDPNSRFPRKLHMLLTYLASNPQLEEEIGLSWISDTEFKMKKKNVALVMGIKLN-TLNVNLR-DLAFEQLQHDKGGWTQWKRSGFTRNSVFED
General information:
TITO was launched using:
RESULT:
Template:
1PP7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 8868 for 500 contacts (17.7/contact) +
2D Compatibility (PS) -8523 + (NN) -1217 + (LL) 308
1D Compatibility (HY) -1200 + (ID) 800
Total energy: -2564.0 ( -5.13 by residue)
QMean score : 0.000
(partial model without unconserved sides chains):
PDB file :
Tito_1PP7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PP7-query.scw
PDB file :
Tito_Scwrl_1PP7.pdb
: