Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
APSAAECKEETRLAIKACKPVVYGMDPSPACCERARVTHVECVCPLITPKLAALIDVNKAVRIIEGCGRKVPRHYKCGSITTP
M038 Chain:A ((3-107))
APSAAECKEETRLAIKACKPVVYGMDPSPACCERARVTHVECVCPLITPKLAALIDVNKAVRIIEGCGRKVPRHYKCGSITTP
General information:
TITO was launched using:
RESULT:
Template:
M038.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1938 for 565 contacts (3.4/contact) +
2D Compatibility (PS) -7988 + (NN) 140 + (LL) 0
1D Compatibility (HY) 4400 + (ID) 200
Total energy: -1710.0 ( -3.03 by residue)
QMean score : -0.012
(partial model without unconserved sides chains):
PDB file :
Tito_M038.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M038-query.scw
PDB file :
Tito_Scwrl_M038.pdb
: