Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VTCGQVVGFLTPCITYLQG---GPG----PSAACCGGVKKLNGAANTGPARKTACNCLKRAAGNIA---R---------LNNNQAAALPGKCGVNIPYKFSTSTNCNSIRF
1HSS Chain:A ((15-106))
-------PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI--------SEWCRCGALYSMLDSMYKEH-GAFPRCRREVVKLTAASITAVCRLPIVVD------------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46152 for 404 contacts (-114.2/contact) +
2D Compatibility (PS) -6544 + (NN) -2506 + (LL) 912
1D Compatibility (HY) -5600 + (ID) 600
Total energy: -60490.0 ( -149.73 by residue)
QMean score : 0.310
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: