Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GPYCRDVVETILPCIEYITTP---G--AST-----------LPAPCCNGMKSLNGEPQYVCRCLKETFFVLP----GLN-----LAALAALPKNCGVNLP--YQITPDMNCDKVN
1W2Q Chain:A ((22-121))
-------RVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAPQRCDLDV--------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45834 for 431 contacts (-106.3/contact) +
2D Compatibility (PS) -7509 + (NN) -1889 + (LL) 260
1D Compatibility (HY) -2400 + (ID) 600
Total energy: -57972.0 ( -134.51 by residue)
QMean score : 0.303
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: