Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
IPIC----NIETNDLVKCHPAFT----G-NNPPPPGPDCCALVRAANLQCLCP---------YKPYLSRFGID----PSKVRPLLTRCGVNTPPS--------CF--------
1HSS Chain:A ((5-124))
--MCYPGQAFQVPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39654 for 405 contacts (-97.9/contact) +
2D Compatibility (PS) -7210 + (NN) 2383 + (LL) 64
1D Compatibility (HY) -2800 + (ID) 750
Total energy: -47967.0 ( -118.44 by residue)
QMean score : 0.000
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: