Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKSDILCKRVIGIVGSGQLGKMTAIAATKLGQETHIFANAKDDPACSVANNLTIADFSDKKALESFAQSVSLVTIESENIPCDAIDIM-S-QYV-DFYPGKRALHISQNRLREKDFIRNLGIRTADYKSIQDHNDLLEVTRAFGYPTRLKTT-EMGYDGKGQYMIGNDSQVERFASFDWNAQYILEASVDLLKEVSIVVTRDKNGKVAFFPVAENHHVDGILDTSIVPAKVDSKLVQEIQQTAEKIADALDVVGILAIEFFITKNSELLVNELAPRPHNSCHWSLDACNVSQFEQLIRVICKLPMQEVVLRFPCMTKNIIGNDVYNTYKYLSDKRANLTIYGKKEVRGRRKMGHVNIDLS |
3ETH Chain:A ((1-323)) | --------MKQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEP-AAVP-------------------FQQSVITAEIERWPE---TALTRQLARHPAFVNRDVFPIIADRLTQKQLFDKLHLPTAPWQLLAERSEWPAVFDRLGELAIVKRRTG-GYDGRGQWRLRANETEQ-LPA-ECYGECIVEQGINFSGEVSLVGARGFDGSTVFYPLTHNLHQDGILRTSVAFPQANAQQQARAEEMLSAIMQELGYVGVMAMECFVTPQ-GLLINELAPRVHNSGHWTQNGASISQFELHLRAITDLPLPQPVVNNPSVMINLIGSDV-N-YDWLKLPLVHLHWYDK-EVRPGRKVGHLNLTDS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ETH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132466 for 2603 contacts (-50.9/contact) +
2D Compatibility (PS) -34980 + (NN) -11861 + (LL) 2640
1D Compatibility (HY) -18400 + (ID) 5000
Total energy: -200067.0 ( -76.86 by residue)
QMean score : 0.396
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