Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKLSYILIVIFISFPILLAASENNEKTQIKDIKCIGNERVGDQTIKFYIKLEPDSYVNDDDIDSIIKSLYKTKLFASVHAYIDNEKKLVIKVQENPLINKVILKGNKQFKSKELLNNVIQSKPLTIFTETKLQSDLVNLVTLYRHNGKIGVKVEYELDKLDGNRVNLIFKVKEGKTSRVKSVRFIGNKNFSENELERAIKVQSNDIFNKLFRAIFKGGNHYSPQYLLTNEELLDRFYSSKGYINNSIQPIAEIDNNNQIELTFLIDEGQQYLFGSNKVNVEAEIQDPDLKEKVLELITKEDNKVFDRVKVSNAVEKINKYLNEIGYIFAKVNPEYTQHGNVVDVTYRVLPGKKIYINQITIDGNDRTLDKVIRSKLSVAEGDAYNTSEVQKSRRRLIGSDFFETVKINSYAIN--DNAVNLDLNVKEKNTTSLYLGGGVSFPGGAFIKTDFKDRNLFGTGKELSFALEKSQYVFSTNVEVVENNFNDSDTSLGVDVFYERQD----KPNTTFDSCDWGGIAQLLHKIIENLTNSIRYSYKYNHIH-MDNKGGKDEDISEI---IRSQQGEY-QISSVGYTLA----YNKLDNLYAPREGYLLRLSQDISGLGGNMNFLKSEFLSFYTHPILSKIDDDIILRFKMAAGYIFSYTDKELNIGQRFFKGG-NEIRGFDLSGIGPRA--------KDKNKSSLGGKTYFNLTQQVDFPLPKLYDYV--GIKGSLFVDYATLFGLDIKKEYEG-----KYHDSKLVRVSPGFGFSMPSPFGGRFRLDFGFPLAKEPYDIIPSSNIKFSIEVGI |
| 4K3C Chain:A ((1-532)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YNISEMRIIGDTQKLDNELNQLLTH-------------FKAGQLFRKTELSIIEEQIKQILGDRGY-------------------------------GSAKVDL---------------------------------------------------YPKFNEEDHTVQINFIVDAGRRIYVRKIRFEGNDVTADSTLRREMRQQEGAWLSTSAVSLAKSRLERTGFYETVEMSMPTVKNTDDQVDIIYKIKERNTGSINFGVGYGSGSGLSYNAGITQDNFLGMGSSLGLNGSRNTDSTNVNLSYTEPYFTKDGVSLGGNIFYEDYDNSARKASAAYKRKTYGASGTLGFPVDENNSYYLGLGYTHDKLRNVEREYTREKYVNSMKFPINPQNSHYDRIQSADFDLSFGWNYNNLNRGYFPTAGSSANISGKLTLPGSDNKYYQVGTNFSGYIPLNS--EHKWVIATKGGLAYTNSFGGKEVPFYQLYSAGGMGSLRGFAGGSIGPKAIYYREDGFKAPSQDVIGGNAMVNASLELIIPAPFISDKYQHNVRTSVFVDAATVWNTKWKQSKADYPNLPDFGDYKRVRASAGIALQWQSPIG-PLSFSYAKPIKKYAGDEIEQFQFTVGSTF-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K3C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 27185 for 3678 contacts (7.4/contact) +
2D Compatibility (PS) -53042 + (NN) -6607 + (LL) 20916
1D Compatibility (HY) -24000 + (ID) 6500
Total energy: -42048.0 ( -11.43 by residue)
QMean score : 0.239
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