Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------MKNIEGQDFGVGLLFYNSGNPLTGVLKFINFYDENNLVLQKDQRRNRQALLDRGRLFSNYLHIKQGWCLCHNVW-------------------------------------------------------------------------------------------------------------- |
| 1GWC Chain:A ((4-224)) | GDDLKLLGAWPSPFVTRVKLALALKGLSYEDVEEDLYKKSELLLKSNPVHKKIPVLIHN-GAPVCESMIILQYIDEVFASTGPSLLPADPYERAIARFWVAYVDDK----LVAPWRQWLRGKTEEEKSEGKKQAFAAVGVLEGALRECSKGGGFFGGDGVGLVDVALGGVLSWMKVTEALSGDKIFDAAKTPLLAAWVERFIELDAAKAALPDVGRLLEFAKAREA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GWC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3458 for 357 contacts (-9.7/contact) +
2D Compatibility (PS) -7097 + (NN) -1007 + (LL) 132
1D Compatibility (HY) -2800 + (ID) 500
Total energy: -14730.0 ( -41.26 by residue)
QMean score : 0.111
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