Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDWLLVSILSIIFVLLILSFLFSGAEIGLTSVSRSRVNKLKLDGNKRAKIIDHLLNKKELTIGTILLGNTIINITCSVLFTAIFINLFGNESVFLSTIVMTFCILLFCEVLPKTYAMQNPEKFTSFSAYFVLFFVKIFSPLTLGIQFIVNFILKLCGFHKNREAISAADAMRNMIALHRSEGTMLQQDLDMLSSILDLAETEISEIMTHRRNLFSLDIDRNKEELIKEILTSSHSRVPLWQKELDNIVGVVHVKNLINALREKDNKIEEVDIAQVMSKPCFLPESTPLSVQLHNFRKNRKHLAFVIDEYGALQGIVTLEDILEEIVGEISDEHDLITENFIKKMSDNVYHIEGKSTIRDINRQLHWDLPDEEATTLAGMIVNEIERIPDEGEEFSMFGFYFRILKKDKNIITVIEVQVKTDNTVTAID |
| 3LV9 Chain:A ((18-147)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FEFEEKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKINEN----KIELEEILRDIIYISENLTIDKALERIRKEKLQLAIVVDEYGGTSGVVTIEDILEEIVGEI--------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LV9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72975 for 927 contacts (-78.7/contact) +
2D Compatibility (PS) -13856 + (NN) -2073 + (LL) 24900
1D Compatibility (HY) -15200 + (ID) 2100
Total energy: -81304.0 ( -87.71 by residue)
QMean score : 0.498
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