Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------------MGLLASLPEG--HTIIGLQFENLMLNNRKSIPNILG---IDEIISENLFFQRKTGNSAIYQIDYI---IRTKFNTLYICEIKFSKNRIGHSIM-------------
3SB1 Chain:A ((41-160))
ARSGNALPLLREIAEHLHHLLETGEASTIDLSALPLTPGDLEWLRAELGGGEVSVTLHDGASTLDETAFPGVWWIIHRNAQGAVTTQFIEVAFVPELVKSPRADVAAARAALVLRMADL
General information:
TITO was launched using:
RESULT:
Template:
3SB1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39737 for 505 contacts (-78.7/contact) +
2D Compatibility (PS) -8859 + (NN) 1910 + (LL) 0
1D Compatibility (HY) 1600 + (ID) 500
Total energy: -45586.0 ( -90.27 by residue)
QMean score : 0.186
(partial model without unconserved sides chains):
PDB file :
Tito_3SB1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SB1-query.scw
PDB file :
Tito_Scwrl_3SB1.pdb
: