Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAAHCYIKKLKLSNFRNHLNFELDSDDSSVVIIGKNGIGKTNILEAISLLA-------------KSNGMKKAKASEMQNRFSNKDWAVHYDFFNGADLNSIGIAKSFNK----------KLIQIGG------------KMQSSYSSLYRISNVIWLIPQMDYILLNSPSDRLKFLDRIVSLFEENYACYYMRYRKAKRERGRLLRENILNKSW--LSSLENIMAVNAVNILDMRLSVLKMLQDTINSYSTQFFPKVSL----------KFNSQLTLSDTAKYFQNRLRENREKDSLTGRITFCVNND-------KFQVFCQRRDLPINL--------CSTGEQKLLLLSIILSSVKARCIHYN----KAPLLLLDDIMSHLDKYYRKVLIEEMLSIRCQAWITDVD--QNNFGNYIDYFKTIEL-------------- |
| 3EUJ Chain:A ((3-483)) | MIARGKFRSLTLINWNGFFARTFDFDELVTTLSGGNGAGKSTTMAGFVTALIPDLTLLNFRNTTEAGSTSSSRDKGLYGKLKAGVCYAVLETVNSRA-QRIITGVRLQQIAGRDKKVDIRPFSLQNVPMTDSVISLFTEQVANKARVLSLNDLKEKFEETAVTFKPYHSITDYHSFMFDLGILPKRLRSSSDRNKFYKLIEASLYGGISSVITKSLRDYLLPENSGVRQAFQDAESVANILRKTIQREQNRILQLNQGLQNIAFGQVKGVRLVVNIRDTHSILLNALSDQSFSEALAMLYKRIGEELLDYRNYLDLEVETLRGAYGWMRAESSALSTGEAIGTGMSILLMVVQSWEEESRRMRAKDILPCRLLFLDQAARLDAMSINTLFELCERLDMQLLIAAPENISPERGTTYKLVRKILANQEYVHVVGLKGFG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EUJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98858 for 2550 contacts (-38.8/contact) +
2D Compatibility (PS) -36930 + (NN) 1205 + (LL) 176
1D Compatibility (HY) -3600 + (ID) 2200
Total energy: -140207.0 ( -54.98 by residue)
QMean score : 0.280
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