Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFITFEGIDGSGKTIQSELLANYFKQIHGENNMVLTREPGGTDFAEKVRGILLK-DSIDPVSELLLLISMRYEHVKKVILPALKKGKIVICDRFIDSTIAYQGYGLGVDLELIRDLHKL-VKIKYPDTTFILDIDVQIGLSR----AMDKNKYEEMNISFYNKVRKGFQEIAINEPDRCSIITEIEAKDNNQVHVEIVNKVTATKPVLLRK
4QG7 Chain:B ((4-177))
-FITFEGPEGSGKTT---VINEVYHRLVKDYDVIMTREPGGVPTGEEIRKIVLEGNDMDIRTEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAINGLYPDLTIYLNVSAEVGRERIIKNS------DQEDLKFHEKVIEGYQEIIHNESQRFKSVNADQPLENVVEDTYQTIIKYLEKI-----
General information:
TITO was launched using:
RESULT:
Template:
4QG7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84270 for 1209 contacts (-69.7/contact) +
2D Compatibility (PS) -17934 + (NN) -12965 + (LL) 1164
1D Compatibility (HY) -12800 + (ID) 3300
Total energy: -130105.0 ( -107.61 by residue)
QMean score : 0.513
(partial model without unconserved sides chains):
PDB file :
Tito_4QG7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QG7-query.scw
PDB file :
Tito_Scwrl_4QG7.pdb
: