Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNFFQKLTGKFCNFFTFKGLFASDIAIDLGTANTLVYQKNQGI---------VLDEPSVVARIKEKGSYIPYAFGKKAKMMLGKTPGEIEAI--------------------RPLK-----DG-------------VIADFKSAEEMLKYFIRSANTKLTVNKPNIIICVPSGSTPVERRAIQDAAESAGANEVFLIEEPMAAAIGAGLPVT-------EPEGSMVVDIGGGTTEVAIISLGG--I--V-YSRSARVGGDIMDEAIRSYIRENHKLLI-------------GETTAEKIKKSLGSASLPDENNKEWMMVKGRDLVSGMPKEMLLSEYQVAESLIEPVHQIISAIKTALESTPPELSSDIVDKGIVLSGGGGLLRNLGKVISETTKLPVHVADDPLCCVALGSGKVLENMDYFSHVLFKQD |
| 3D2F Chain:A ((2-384)) | ---------------------STPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPK---N--RYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTN------APFSVE--SVMNDVDVSSQLSREELEELVKPLLERVTEPVTKALAQAKLSA-EEV--DFVEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFICAIHSPTLRVRPFKF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D2F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132014 for 2584 contacts (-51.1/contact) +
2D Compatibility (PS) -33969 + (NN) -12873 + (LL) 1188
1D Compatibility (HY) -5200 + (ID) 3350
Total energy: -186218.0 ( -72.07 by residue)
QMean score : 0.487
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