Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEAKFIFVTGGVVSSLGKGLVASSVGALLQAHGFKVRIRKLDPYLNIDPGTMSPTQHGEVFVTEDGAETDLDLGHYERFTGIKATKDDNITTGKMYHELLKKERRGDYLGKTVQVIPHVTDLIKSFIFNGTEGLDFVICEIGGTVGDIESQPFLEAIRQISYKLGKQRVILIHLTLVPYLAVAQELKTKPTQHSVRELNFVGLQPDIILCRSEKEISDNQRGKIANLCNVSLSNVISAPDVSHIYELPVLYNQCGLGTQVLEHFHLSKPKPSLVGWNQIVHSMRHPMQEVTVSIVGKYTEFPDTYKSLVEALSHSAISNRIEVKINWVNSREKSGKPI---N--EKFMGDKLKNSHAILVPGGFGDDGIEGKMLAISYARTNNIPFFGICLGMQLAVIEFARNVIKFKDVHSEEFYTCK-HPIIKLAGD-KNVDLGGTMRLGAYK-CNISPNSKMAGAYSD-TIISERHRHRYIINLDYKDDLEKNGLICSGMSEDGTYIEAVELENHPWFIGVQFHPEFQSKPFSPHPLFVSFIKAVVNKVKKTEG |
| 2V4U Chain:A ((296-554)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKICSIALVGKYTKLRDCYASVFKALEHSALAINHKLNLMYIDSIDLEKITETEDPVKFHEAWQKLCKADGILVPGGFGIRGTLGKLQAISWARTKKIPFLGV-LGMQLAVIEFARNCLNLKDADSTEFRPNAPVPLVIDMPEHNPGNLGGTMRLGIRRTVFKTENSILRKLYGDVPFIEERHRHRFEVNPNLIKQFEQNDLSFVGQDVDGDRMEIIELANHPYFVGVQFHPEFSSRPMKPSPPYLGLLLAATGNLNAY-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V4U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123105 for 2092 contacts (-58.8/contact) +
2D Compatibility (PS) -26770 + (NN) -12891 + (LL) 18348
1D Compatibility (HY) -19200 + (ID) 5150
Total energy: -168768.0 ( -80.67 by residue)
QMean score : 0.567
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