Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSGNVLLTFCSNSGYLRSDMNAVKNLVIWLLIIVITAMFIDSQKDRLRNRFLSTFLPYRGRIQDSRSVEFTKSYDGHFYIQAQVNGHNITFLLDTGATDIVLSQKDALYAGIKLQDIQDFKIYETAKGQIRAGVVQIPQIKIGNFLINDVQASVNTHSMPHSLLGMSFLKYFHFTIRGNKLILYCNSTY |
| 1FMB Chain:A ((5-98)) | --------------------------------------------------------------------------LEKRPTTIVLINDTPLNVLLDTGADTSVLTTAHYNRLKYR-GRKYQGTGIGGVGGNVETFS-TPVTIKKKGRHI-KTRMLVAD--IPVTILGRDILQDLGAKLVL----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FMB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54106 for 662 contacts (-81.7/contact) +
2D Compatibility (PS) -10248 + (NN) -507 + (LL) 6824
1D Compatibility (HY) -1200 + (ID) 900
Total energy: -60137.0 ( -90.84 by residue)
QMean score : 0.414
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