Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNIFKRISSLILSKLDKLKQGVSSVTNFIVEPPSNRAHGDIYTNIAMVLAKHEKKKPVEIAEVLAKEFALFDEIARVEIAGPGFINMHLKIEVWHGILEQINELKTEFGTLNIGNNQAINVEFVSANPTGPLHIGHARGAVFGDVLTNLLKKVGYRVTKEYYINDAGAQIDTLVRSVYLRYKEALGEKISIEKGLYPGEYLKPIGEELAKKYGRELLEKQDNRVIREYTLSSILELIKEGMNLLGVSHDVFTSEYELQKSGKIEKSIKLLSDKGLVYEGYLEKPKSKESENWTSRKEMLFRSTEFGDDVDRALKKEDGSWTYFASDIAY-------HFDKI-S---------RGF---N----------------NMIVALGSDHGG-YIKRLKAVISALSDNQAKIEVKLHNVVNFFENGKPVKMSKRSGNFLTVRDVVEEVGRDITRFIMLTRKNDMVLDFDFTKVKEQSKDNPIFYVQYAHVRAHSLMRNAPKELPKANPSLLKTNGELFLIKTLAKWPDVVETAA-RLCEPHRITFYLLEVAEAFHILWGYGKSDLNMRFILEDNPNLTAARMFLVQALVHVIASGLSMFNIEPLEEMK |
| 1LI5 Chain:A ((19-397)) | ------------------------------------------------------------------------------------------------------------------HAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKLKYVRNITDIDDKIIKRANEN-----------------------------------G----------ESFVAMVDRMIAEMHKDFDALNILRPDMEPRATHHIA-EIIELTEQLIAKGHAYVAD-------NG-------DVMFDVPTDP--TYGVLSRQ-------------KRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQSTCAHDG--QYVNYWMHSGMVMVD--REKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQLNYSEENLKQA---------RAALERLYTALRGTDKTV--------A-------PAGGEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNRLKAEDM--------------------AAANAMASHLRKLSAVLGLLEQEPEA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LI5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148295 for 2515 contacts (-59.0/contact) +
2D Compatibility (PS) -34674 + (NN) -12015 + (LL) 15760
1D Compatibility (HY) -4000 + (ID) 2800
Total energy: -186024.0 ( -73.97 by residue)
QMean score : 0.415
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