Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------MEAYMLASNSTETILVADQNIYNSSASN-NPALNTQDLSGSTPDKDKYVTLNSKEEWDKFFKLQNNPSTNITNKVRTKPHVRKNSNGMYRYTAEENKYNGKEIIGKVAEQIKEEISQKIKSDTMKLVKLKE----------SKNEDNSVKPAIRIVLNDNVKEINMADLLSGSVCKEYNVKAITFCFPDKSNTRGIRCR--------IDEHGTRIYEVANGSYEMDLRWYCEGKE-------CKIKILMKDDGSIRLIEDNGITEEQLKAHKEIRVGRQYEAKSLHEALALQLPQLQQKCSETTEILSRLADVSTSQAQQVLSAQVSK-------------------------------------------- |
| 2OLN Chain:A ((3-387)) | ESYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFFNENGGTSGAERHWRLQYTQ--EDLFRLTLETLPLWRALESRCERRLIHEIGSLWFGDTDVVTNEGQISGTAAMMDKLSVRYEWLKATDIERRFGFRGLPRDYEGFLQPDGGTIDVRGTLAALFTLAQAAGATLRAGETVTELVPDADGVSVTTDRGTYRAGKVVLACGPYTNDLLEPLGARLAYSVYEMAIAAYRQATPVTEAPFWFAFQQPTPQDTNLFYGFGHNPWAPGEFVRCGPDFEVDPLDHPSAATGVADRRQMDRLSGWLRDHLPTVDPDPVRTSTCLAVLPTDPERQFFLGTARDLMTHGEKLVVYGAGWAFKFVPLFGRICADLAVEDSTAYDISRLAPQS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OLN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 98747 for 2163 contacts (45.7/contact) +
2D Compatibility (PS) -32190 + (NN) -9836 + (LL) -88
1D Compatibility (HY) 1200 + (ID) 1450
Total energy: 56383.0 ( 26.07 by residue)
QMean score : 0.130
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