Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHVHKNVVEFFLNQELNISDPDKDGWTSLHYAVQRGCLEVVKFLARKGKSINVENAYGSKPVHRAASGGHKNVVEFFLIKE
2Y1L Chain:F ((59-133))
---HLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNG
General information:
TITO was launched using:
RESULT:
Template:
2Y1L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34948 for 589 contacts (-59.3/contact) +
2D Compatibility (PS) -8135 + (NN) -4783 + (LL) 444
1D Compatibility (HY) -6400 + (ID) 1300
Total energy: -55122.0 ( -93.59 by residue)
QMean score : 0.462
(partial model without unconserved sides chains):
PDB file :
Tito_2Y1L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Y1L-query.scw
PDB file :
Tito_Scwrl_2Y1L.pdb
: