Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVQATYASISLPGISSVEDVLEDARFGKLFILVDDENRENEGDLIVLAEKLKPEHVAFMVRYGTGIVFLAMTRLHMGRLGLEFMRRSNIDEKLTPHTAFTTSIDARY-GIATGVSAHDR--THTILTAIDGKSTQDDIITPGHVFPIIANDGGVLARNGHTEASVEIAKLIGYNHAAVGCELVNDDGS------------MMRLPELLKFAEQHNIKLTTIDKLIRYIKKLS
1K4O Chain:A ((12-222))
-------------FDAIPDVIQAFKNGEFVVVLDDPSRENEADLIIAAESVTTEQMAFMVRHSSGLICAPLTPERTTALDLPQMVTHNADPR---GTAYTVSVDAEHPSTTTGISAHDRALACRMLAAPDAQPSH--FRRPGHVFPLRAVAGGVRARRGHTEAGVELCRLAGKRPVAVISEIV-DDGQEVEGRAVRAAPGMLRGDECVAFARRWGLKVCTIEDMIAHVEKTE
General information:
TITO was launched using:
RESULT:
Template:
1K4O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -138358 for 1630 contacts (-84.9/contact) +
2D Compatibility (PS) -21467 + (NN) -7971 + (LL) 820
1D Compatibility (HY) -12800 + (ID) 4050
Total energy: -183826.0 ( -112.78 by residue)
QMean score : 0.489
(partial model without unconserved sides chains):
PDB file :
Tito_1K4O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1K4O-query.scw
PDB file :
Tito_Scwrl_1K4O.pdb
: