Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRTQYNNLVSSYARALFLVSENKLSVVRKEVEFLLAFFKSQHDVFIYLSHPMISFARKKEVIFSVNEHLSESLVKFIAVIFANKRSNLLISVLEKFLTLVRESENELEITIKSAETLSESNIKIITESLSFLGKIVRVDNAVDPSILGGFIVKYGFNLIDASLKSYLDRLVDLSKVEILKTRNFI
3PG6 Chain:A ((25-159))
QKGNQPEGSMVFTVSRDSLPGYESFGTIVITYSMKAGIQTEEH------PNPGKRYPGIQRTAYLPDNKEGRKVLKLLYRAFDQK----------------------LIFTVGYSRVLGVSD------------VITWNDIHHKTSRFGG-PEMYGYP--DPSYLKRVKEELKAKGIE--------
General information:
TITO was launched using:
RESULT:
Template:
3PG6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30035 for 982 contacts (-30.6/contact) +
2D Compatibility (PS) -14375 + (NN) -1371 + (LL) 5260
1D Compatibility (HY) 800 + (ID) 1100
Total energy: -40821.0 ( -41.57 by residue)
QMean score : 0.208
(partial model without unconserved sides chains):
PDB file :
Tito_3PG6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PG6-query.scw
PDB file :
Tito_Scwrl_3PG6.pdb
: