Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSFSSLQDKGMKNSEFLKGEVSFEQKAKILLEALSSIPNFVGETFVIKCGGITISDETLFNTFVHNVVLLKQLGINPVIVHDGEYEIDSVLKILGINSKFVNDIRLTDKDTMRIIEMVLCGSINKKIVQHINSAGGSAIGLCGKDGNLIKAEKISTTLRENGSNNVEKILDMGFIGIPTEINPDILFFIEESDFIPVIAPIGHGKNGETYHIDADGAAGAIAVAVSASKMIIFSD---VCEEMDKIDG--RKISVKNLNASINCGKIKGERFVEKLTACAKMVEECAGIAHIVNGRIPN-IMIDLFTESNSSVSIVNDL |
| 2V5H Chain:B ((28-309)) | --------------------AGAADRVRILSEALPYLQQFAGRTVVVKYGGAAMKQEELKEAVMRDIVFLACVGMRPVVVHGGGPEINAWLGRVGIEPQFHNGLRVTDADTMEVVEMVLVGRVNKDIVSRINTTGGRAVGFCGTDGRLVLAR----------PHDQEGI---GFVGEVNSVNSEVIEPLLERGYIPVISSVAADENGQSFNINADTVAGEIAAALNAEKLILLTDTRGILEDPKRPESLIPRLNIPQSRELIAQG-IVGGGMIPKVDCCIRSLAQGVRAAHIIDGRIPHALLLEIFTDAGIGTMIVGSG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V5H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -207471 for 2326 contacts (-89.2/contact) +
2D Compatibility (PS) -30028 + (NN) -10620 + (LL) 1784
1D Compatibility (HY) -26000 + (ID) 4950
Total energy: -277285.0 ( -119.21 by residue)
QMean score : 0.528
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