Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRIPFLLILIIVIASLPVINNWLSYHNQTLNDDYIGERLDNYISRNFDKIIKILREESIKSNYAARDNATKGKILQYENKIFDLAYPYLGNE--NSNIIAVGFFDYSCGYCKAIKDDIKQLI-NDGKIKYIFRDTPILG--NNSLKAAKSALAVYFID--------------KGKYFDFHYAILDHKGEFS-----DENILDIVKSIGINEDNFNNSMKNNAGKIEQMINDSKFLVRELGAGGTPFLIIGDSLFIG---ATDLDVLRKKVDELSHKQN |
3C7M Chain:A ((5-195)) | ------------------------------------------------------------------------------------TDYMVLEKPIPNADKTLIKVFSYACPFCYKYDKAVTGPVSEKVKDIVAFTPFHLETKGEYGKQASEVFAVLINKDKAAGISLFDANSQFKKAKFAYYAAYHDKKERWSDGKDPAAFIKTGLDAAGMSQADFEAAL--KEPAVQETLEKWKASYDVAKIQGVPAYVVNGKYLIYTKSIKSIDAMADLIRELASK-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C7M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65244 for 1259 contacts (-51.8/contact) +
2D Compatibility (PS) -17782 + (NN) -9925 + (LL) 6364
1D Compatibility (HY) -6800 + (ID) 1400
Total energy: -94787.0 ( -75.29 by residue)
QMean score : 0.426
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