Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVTINKDVLAKEKVVVAPEPIEKSEQIFDNGMIKQTTNEGIKEIRKTLNLSELREKTAEELLNLAEERKISTNGKGNGRMLKQEMIFNLMKKMSEEGGITIGSGVVEILPDGFGFLRSANANYAPSTDDVYISNGQIKKFNLRTGDIVCGEIRPPSDKERYFTLTKVQGINFTEVSELRKYVHFDNLLPLYPEESLILENNSSGDNKKDINMRAVDIVAPLGKGQRALIVAPPRTGKTILLQQMAHSIATNHPEIELIVLLIDERPEEVTDMMRSVKGEVVSSTFDEPAYRHVQLAEIVIEKAKRMVEHKKDVVILLDSITRLARAYNAIIPSSGKVLTGGVDSNALQRPKRFFGAARNIENGGSLTIIATALIETGSKMDEVIFEEFKGTGNAEIILDRKLADKRIFPAIDITKSGTRKEELLIDKAILNKIWVLRRILSPMGPVEAMEFLRDKLLLTKSNSDFFNSMNN
1PVO Chain:D ((1-416))-----------------------------------------------MNLTELKNTPVSELITLGENMGL----ENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQDGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVNFDKPEN--NKILFENLTPLHANSRLRM----G--STEDLTARVLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPA---VLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDYNRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFEMMK-


General information:
TITO was launched using:
RESULT:

Template: 1PVO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -179513 for 3430 contacts (-52.3/contact) +
2D Compatibility (PS) -44436 + (NN) -24170 + (LL) 3272
1D Compatibility (HY) -43600 + (ID) 12500
Total energy: -300947.0 ( -87.74 by residue)
QMean score : 0.526

(partial model without unconserved sides chains):
PDB file : Tito_1PVO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1PVO-query.scw
PDB file : Tito_Scwrl_1PVO.pdb: