Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLNRSTDTKRKEMIELKGPEICTDRSRENLIVCLHGRGSSGNNFVHLA------KVMSKSLPNSCFVAPNAPSKREIGNGYQWFSLEDRSEEVLYNGVKNAASIVNHFIDTKLKEFSLKDTQLSLVGFSQGAMLAIHTALTRPQCCASVVAYSGKFLSPSRVAPKIKSRPNVCVIHGDADNVVPFSFFDLTVKALKENGVNVEGYPIRTLGHLIN-KEGIKLGVEFIKKNFKK
3WYD Chain:A ((23-217))-------------YRLYVPTTYDGTKAFPLVIALHGMGGDENSYFDSYQRGAFMIEAEN--RGYIVACPKG------------YV-------------GPAERDVMDVIAEVRRDYKIDPDRIYMTGHSMGGYGTWSIAMNHPDVFAALAPVAGGGNPLG---MANIAHIPQLVVHGDNDKTVPVERSRVMVEAAKKHGTEIKYIEIPGGDHVSVAARTFKDVFDWFDSHKRK


General information:
TITO was launched using:
RESULT:

Template: 3WYD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119825 for 1579 contacts (-75.9/contact) +
2D Compatibility (PS) -19635 + (NN) -9754 + (LL) 2660
1D Compatibility (HY) -6400 + (ID) 1650
Total energy: -154604.0 ( -97.91 by residue)
QMean score : 0.452

(partial model without unconserved sides chains):
PDB file : Tito_3WYD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3WYD-query.scw
PDB file : Tito_Scwrl_3WYD.pdb: