Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDLGPIIENWHEWLRCYRSYSSNTLESYMRDLK-DFISFLSAHIGEEVNVGSLEKLSVPELRSWFSFRYARGINARSNTRALSVIRNFFKYIKNNYEVNNEAVFSLSRPIQRRTLPKALSISDIKTLVDFFLHNYSLQETHSSLSFQYATKKKESVLSTQLYKHCNFSLPGFQCSDTRKLIINKRTLSIKNWIPVLSIGTTEGNTKTSVKEIKLLDLGEPWIIKREIAIIVLLYGTGLRISEALNLKVSDISNESLIVTGKGDKQRQVFILPVVKMFIQEYVKACPYLSVNNEAQHLFVGVRGKKLGRTYVANRLQKIRRMLNLPEIVSPHAFRHSFATHLLQENVDIRFIQQLLGHSSLETTQVYTHLNYQDVFNMYKNFQQSLEKDKKLKL |
| 2KKV Chain:A ((7-102)) | YTFETIAREWHESN---KRWSEDHRSRVLRYLELYIFPHIGSS--------DIRQLKTSHLLAPIKEVDT-SGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPLEHHHHHH-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KKV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52681 for 579 contacts (-91.0/contact) +
2D Compatibility (PS) -9706 + (NN) 1597 + (LL) 21156
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -42234.0 ( -72.94 by residue)
QMean score : 0.463
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