Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFGNIKWFNAEKGYGFI-------KPEANGNDIFVHISTLERSGIR------PDSLRGENKEKGIKGERVSYELKEERGRNGEGKKFAINLKLLED
4A75 Chain:C ((11-79))
---GHCKWFNVRMGFGFISMTSREGSPLENPVDVFVHQSKLYMEGFRSLKEGEPVEFTFKKSSKGFESLRVTGPGGNPCLGN---------------
General information:
TITO was launched using:
RESULT:
Template:
4A75.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11037 for 317 contacts (-34.8/contact) +
2D Compatibility (PS) -5680 + (NN) 1352 + (LL) 924
1D Compatibility (HY) -5200 + (ID) 1200
Total energy: -20841.0 ( -65.74 by residue)
QMean score : 0.577
(partial model without unconserved sides chains):
PDB file :
Tito_4A75.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4A75-query.scw
PDB file :
Tito_Scwrl_4A75.pdb
: