Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIERTLSILKPDTVKNNIIGNINSYIEKSGLRIIAQKMMLLTKKQAELFYAIHKDRPFFGGLVEFMTSGPVIVQVLVGENAISKYRQIMGATDPKQ-ADKGTIRGDFADDVNENRVHGSDSLENAHKEIAFFFAECELV
4ANE Chain:D ((3-133))
---ERTLVLIKPDGIERQLIGEIISRIERKGLTIAALQLRTVSAELASQHYAEHE----FGSLLEFITSGPVVAAIVEGTNAIAAVRQLAGGTDPVQAAAPGTIRGDFALETQFNLVHGSDSAESAQREIALWFPGA---
General information:
TITO was launched using:
RESULT:
Template:
4ANE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48883 for 969 contacts (-50.4/contact) +
2D Compatibility (PS) -13467 + (NN) -1583 + (LL) 876
1D Compatibility (HY) -8000 + (ID) 3200
Total energy: -74257.0 ( -76.63 by residue)
QMean score : 0.416
(partial model without unconserved sides chains):
PDB file :
Tito_4ANE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ANE-query.scw
PDB file :
Tito_Scwrl_4ANE.pdb
: