Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLDKTTKNLLITEINKILPEDSQNR-LISAVRYVLLAPAKHIRPFLVVASSQVFNVEIERVISIAMAVECIHTYSLIHDDLPCMDNSDTRRGQLSCHKRFDKATAVLAGDALLTLAFEILSSLN--EGSNK-RCEIIKALSQAIGAKGMVGGQILDIKTALHVIQHHDYLDPESSVINEHTRQLCNKNRTLGSCAKITPDSKIKEIHLMKTAKLFAASCEIGAIIGSATDKQRRALY---NYGVNLGLIFQAKDDIRDYKQDEV-NNLMSML----SKSEIENYIDNLFKQALDNLGELSGDTNYLYNLLNQVKRDD |
2FOR Chain:B ((46-318)) | ----------------IAPLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDANMPEVSDRDRISMISELASASGIAGMCGGQALD-------------LDAE---------------------GKHVPLDALERIHRHKTGALIRAAVRLGAL--SAGDKGRRALPVLDKYAESIGLAFQVQDDILDVV----KSTYPALLGLEQARKKARDLIDDA-RQALKQLAEQSLDTSALEALADYIIQRN |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FOR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -150198 for 2010 contacts (-74.7/contact) +
2D Compatibility (PS) -25845 + (NN) -11022 + (LL) 4168
1D Compatibility (HY) -15200 + (ID) 5650
Total energy: -203747.0 ( -101.37 by residue)
QMean score : 0.535
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