Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYQYYNRIFNILLIIVL-LLSNVTYADASESMHQIGSDIVVGLLKTEKETYPHELGLFQSIYEMFN--------SFGVR-TVFIDCNKIINLKKIQEELLSLLKQ-------------------DEMLAK-KLILDRIK---------IEI-GQFIKGHKINRIFIPENYYNLHSE----------------PFPPTPCCQLVTEAIVKIVDDNP-TIHLLSICG----------------GLQGIMSAKGIEVVH-VENFVSDEEQRRS-HLKSAP-NPQQEDVTFQQIKIVPNSH-LAK------VVA-K-FLLPDKNGWFSTCF------PDAHSGTVNNRPENRRKLELLG---------YKIAAF-SNDGVIEAIEDKHGN------IYFQSHPEALVVKSD-------KNLHLSN-------HKARQVSTLVAMAIINDFLYRA------ |
| 3LM3 Chain:A ((13-448)) | --EPLTIEGNRFVTLCIMIRTTPWEVSRDVKLHP------------RDEVDWHTLEGVRALREAFATNNPNGRLTWGFTMNALED--GRKNYREIRDYVVECQKKYGDEVTYFPGYFPAMYLPRERVNREMSEAIEIISKMVGNGYRPQSIMGGFLSADNLRYLAEKENIHVAHAVIWSQHNGGGADGSPSYPFYPS------TEHFCKPAQGKSDFIDCVNLDGWTMDFICARRSGQTGHGIDGYNSRRGVGPIETYKGWGLDLGHREVMHTEAIHFDKGLELNGFGWVANIWEAQMVHEFGKDLICDAMKMWVTGTKERWPDTHFVTFGEFGELWRKQYKSNDDWNYRFVERGSGLGDSYNNLEIKWFMNKEFRLALLRDWHTKNSPAYVIDFTRYDLQAHEPADPSPEKPAKDWSLINKINQKALRPQDKPVLIDKLEKEDQDLIRKYYPELL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LM3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -62024 for 2124 contacts (-29.2/contact) +
2D Compatibility (PS) -31995 + (NN) 912 + (LL) 1548
1D Compatibility (HY) -6400 + (ID) 2750
Total energy: -100709.0 ( -47.41 by residue)
QMean score : 0.141
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