Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIILVQEVVVEGDINLGQFLKTEGIIESGGQAKWFLQDVEVLINGVRET---RRGKKLEHQDRIDIP---ELPEDAGSFLIIHQGEQ |
1KYX Chain:D ((24-67)) | ------------------------------HARWNLQAIEPLVKGAVETMIEKHDVKLENIDIESVPGSWELPQ------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KYX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3383 for 151 contacts (22.4/contact) +
2D Compatibility (PS) -3810 + (NN) 31 + (LL) 3184
1D Compatibility (HY) -1600 + (ID) 850
Total energy: 338.0 ( 2.24 by residue)
QMean score : 0.451
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