Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLNTLQLENYRNY--------DEVTLKCHP-DVNILIGENAQGKTNLLESIYTLALAKSHRTSNDKELIRFNADYAKIEGELSYRHGTMPLTMFITKKGKQVKVNHLEQSRLTQYIGHLNVVLFAPEDLNIVKGSPQIRRRFIDMELGQISAVYLNDLAQYQRILKQKNNYLKQLQLGQKKDLTMLEVLNQQFAEYAMKVTDKRAHFIQELESLAKPIHAGITNDKEALSLNYLPSLKFDYAQNEAARLEEIMSILSDNMQREKERGISLFGPHRDDISFDVNGMDAQTYGSQGQQRTTALSIKLAEIELMNIEVGEYPILLLDDVLSELDDSRQTHLLSTIQHKVQTFVTTTSVDGIDHEIMNNAKLYRINQGEIIK |
1G6H Chain:A ((4-257)) | -TMEILRTENIVKYFGEFKALD-GVSISVNKGDVTLIIGPNGSGKSTLINVITGFLKAD------------------------EGRVYFEN----KDITNK---------------------------EPAELYHYG-IVRTFQTPQPLK-EMTVLENLLIGEICPGESPLNSLFYKKWIPKEEEMVEKAFKILEFLKL-SHLYD------------------------RKAGELS-------GGQMKLVEIGRALMTN------PKMIVMDEP--------IAGVA------------PGLAHDIFNHVLELKAK-GITFLIIEHRLDIVLNY--IDHLYVMF--NGQIIAEGRGEEEIKNVLSDPKVVEIYIGE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G6H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18010 for 1987 contacts (-9.1/contact) +
2D Compatibility (PS) -26189 + (NN) -8446 + (LL) 9268
1D Compatibility (HY) -7200 + (ID) 1950
Total energy: -52527.0 ( -26.44 by residue)
QMean score : 0.254
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