Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNYFRYKQFNKDVITVAVGYYLRYTLSYRDISEILRERGVNVHHSTVYRWVQEYAPILYQIWKKKHKKAYYKWRIDETYIKIKGKWSYLYRAIDAEGHTLDIWLRKQRDNHSAYAFIKRLIKQFGKPQKVITDQAPSTKVAMAKVIKAFKLKPDCHCTSKYLNNLIEQDHRHIKVRKTRYQSINTAKNTLKGIECIYALYKKNRRSLQIYGFSPCHEISIMLAS |
2COB Chain:A ((12-57)) | ------RQYNSEILEEAISVVMSGKMSVSKAQSIY-----GIPHSTLEYKVKERLGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2COB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -47861 for 295 contacts (-162.2/contact) +
2D Compatibility (PS) -4525 + (NN) 2514 + (LL) 14228
1D Compatibility (HY) -2800 + (ID) 500
Total energy: -38944.0 ( -132.01 by residue)
QMean score : 0.419
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