Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------MTYDKKMINRINRIQGQLNGVVKMMEEEKDCKDIITQLSASKGSIQRLMGIIISENLIECVKTAEENNESSQELINEAVNLLVKSK------------------------------------- |
| 4GA2 Chain:A ((2-145)) | RRSKADVERYIASVQGSTPSPRQKSIKGFYFAKLYYE---AKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEEN---------TDKAVECYRRSVELNPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGSPAVYKLKEQLLDCEGED |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GA2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3397 for 491 contacts (6.9/contact) +
2D Compatibility (PS) -7902 + (NN) -3541 + (LL) 1584
1D Compatibility (HY) -4800 + (ID) 550
Total energy: -11812.0 ( -24.06 by residue)
QMean score : 0.414
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