Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MKQVIGYLRQS-----TMKQQSLAAQKQAIEAIAEKHHIQ--HINFYSDKQSGRKDNRSGYRQMTQLIQQGQCDILCCYRLNRLHRN-LKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRFKLNIFISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGY---EYHNGAFIINQNESPTVKAVFNYYIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSIYEQAQRLRSQKQIKQTSSDNQLKQKIKCPCCNTTLTNMTVRKKNHTLRYYVCPKNMNASRFVCDFKGINAQTLEDKVLEVCKDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHTLTQEQLIEKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIHITKDKNLIGIYFKNEPLNIVNQTMQSSIA |
| 4BQQ Chain:A ((26-395)) | MDTYAGAYDRQSRERSAASPATQRSANEDKAADLQREVERDGGRFRFVGHFSEAPGAERPEFERILNECRAGRLNMIIVYDVSRFSRLKVMDAIPIVSELLALGVTIVSTQEGVFRQGNVMDLIHLIMRLDASHKESSLKSAKILDTKNLQRELGGYVGGKAPYGFELVSETKEITRNGRMVNVVINKLAHSTTPLTGPFEFEPDVIRWWWREIKTHKP----------------------------------GSITGLCKRMDADAVPTRGWDPATVMRILRDPRIAGFAAEVIYKKKPD-------------------------------------------------GTPTTKIEGYRIQRDPITLRPVELDCGPIIEPAEWYELQAWLDGRGRGK--------------------------GLSRGQAILSAMDKLYCECGA--------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4BQQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 3407 for 2310 contacts (1.5/contact) +
2D Compatibility (PS) -34467 + (NN) -6835 + (LL) 8656
1D Compatibility (HY) -4800 + (ID) 1650
Total energy: -35689.0 ( -15.45 by residue)
QMean score : 0.211
|
|
|