Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MFDDKILLITGGTGSFGNAVMKRFLDSNIKEIRIFSRDEKKQDDIRKKYNNSKLKFYIGDVRDSQSVETAMRDV--DYVFHAAALKQVPSCEFFPVEAVKTNIIGTENVLQSAIH-----QNVKKVICLSTDKAAYPINAMGISKAMMEKVFVAKSRNIRSEQTLICGTRYGNVMASRGSVIPLFIDKIKAGEPLTITDPDMTRFLMSLEDAVELVVHAFKHAETGDIMVQKAPSSTVGDLATALLELFEADNAIEIIGTRHGEKKAETLLTREEYAQCEDMGDYFRVPADSRDLNYSNYVETGNEKITQSYEYNSDNTHILTVEEIKEKLLTLEYVRNELNDYKASMR |
| 4TQG Chain:A ((1-319)) | SQINDKTIMIFGGSGSLGNRLIETYINNN--IIVNYSRDESKHWSMELKYKSDKLKNIIGDIRDFEKVQQSIMRINPDIIIIAAALKHIDRCEYEINECLDTNIKGLQNVLKVTEINRSNLSNLKAVCFVSTDKACSPVNSYGMSKAICETLVVEKSKYIKD--IKYVCVRYGNVL------------------NFTLTHTSMTRFIMTLDDSVKLIEYAIINGNSGEIVIPKLNSMYIKDMIELFADKYP----IVITGLRSGERMYESLINDTQSMKTVPKGDYYHILPTYDPTIVTE----------EFYEYSSKQ-NILSKQELENYLNQ---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TQG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110345 for 2358 contacts (-46.8/contact) +
2D Compatibility (PS) -30988 + (NN) -11802 + (LL) 3692
1D Compatibility (HY) -24800 + (ID) 5150
Total energy: -179393.0 ( -76.08 by residue)
QMean score : 0.518
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