Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKVGIVGGSGYGAIELIRLLQTHPHVTIAHIYSHSK-VDEPLKLTFPHLQ------HIMQ-HFEALT-VDNNDCDVIFFATPAPVSKTCIPPLVEKGIHVIDLSGAFRIKNREIYEAYYKETAAAQDDLNHAIYSISEWQSFDNN-----------GTKLISNPGCFPTATLLALHPLISEKIVDLSSIIIDAKTGVSGAGRSLSQRVHFSEMNENLSAYAIGNHKHKPEIEQYLSIIAGQ---------DVSVIFTPHLVPMTRGILSTIYVKFSSEYTTESLHKLMTSYYANQ----------PFVRIRDIGTFPTTK-EVLGSN--YCDIGI-YVDETTQTAILVSVIDNLVKGASGQAIQNLNILYDFEVTTGLNQSPVYP |
| 2EP5 Chain:A ((4-347)) | KIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVSTNYEDHKDVDVVLSALPNELAESIELELVKNGKIVVSNASPFRMDPD-------------------VPLINPEINWEHLELLKFQKERKGWKGILVKNPNCTAAIMSMPIKPLIEIATK--SKIIITTLQAVSGAGYNGI---SFMAIEGNIIPYIKG---EEDKIAKELTKLNGKLENNQIIPANLDSTVTSIRVPTRVGHMGVINIVTNERINIEEIKKTLKNFKSLPQQKNLPTAPKQPIIVRDEEDRPQPIIDVNAESGMAVTVGRIRHE--NNVLRLVVLGDNLVRGAAGITILTVEVMKEL------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EP5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -223854 for 2574 contacts (-87.0/contact) +
2D Compatibility (PS) -32188 + (NN) -7427 + (LL) 2708
1D Compatibility (HY) -13200 + (ID) 3350
Total energy: -277311.0 ( -107.74 by residue)
QMean score : 0.439
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