Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRENFKLRKMKVGLVSVAITMLYIMTNGQAEASETNQKVSTNQESKAVSQTEQNSKETKAAESSKNFVNLDPIKPGAQKVTGTTLPNHIILLNIDGKSADSVEGGYGDFITANDKGEFEYPLNNRKIVHNQEIEVSSSSPDLGDDEEDEEVEESSTEKAGAEEESTDAKATYTTPRYEKAYEIPKEQLKEKDGHHQVFIEPITEGSGIIKGHTS-VKGKVALSINNKFINFEERAKGGISKEDTKASSDGV--WMPINEKGYFDFDFKKNPFDNLELKKNDEISLTFAPDDEDEALKSLIFKTKV--TSLEDIDKAETKYDHTKVEKVKVLKDVKEDIHVDEIYGSLYHTEKGKGILDKQGTKEITGKTKFANAVV-KVYSDLGDAQLFPDIQVDENGKFSFDAEKAGFRLQNGETLNFAVVKPITGDLLHQGFVSKYIDVYESPEEKKEREFEEKLENTPAYHKLHGDK----IVGYDVQGNPSTWFYPLGEKKVERTTPKLEK |
| 4PG7 Chain:A ((20-446)) | -----HMKKLNIALLGLG-----------------------TVGSGVVKIIEENRQQIQDTLNKDIVIKHILVRDKSKKR-----PLNISQYHLTEDVNEILNDDSLDIIVEVMGGIEPTVDWLRTALKNKK-HVITANKDL-------LAVHLKLLEDLAEENGVALKFEASVAGGPN---------------------NISKFMGILNGTSNFILSKMTKEQTTFEEALDEAKRLGFAEADPTDDVEGVDAARKVVITSYLSFN------QVIKLNDVKRRGISGVTLTDINVADQLGYKIKLIGKGIYENGKVNASVEPTLIDKKHQLAAVEDEYNAIYVIG------------DAVGDTMFYGKGAGSLATGSAVVSDLLNVALFFESTLPPHFELKTDKTRE-----MEKSNFFVVVNHVKGS-----------------IENFENELKAILPFHRSLRVANYDNQSYAAVIVGLESSPEELITKHG-YEVDKVYPVEGV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PG7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 196905 for 3082 contacts (63.9/contact) +
2D Compatibility (PS) -40983 + (NN) -326 + (LL) 6716
1D Compatibility (HY) -11600 + (ID) 3450
Total energy: 147262.0 ( 47.78 by residue)
QMean score : 0.119
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