Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----MKVTDVRLRKIQTDGRMKALVSITLDEAFVIHDLRVIEGNSGLFVAMPSKRTPDGEFRDIAHPINSDMRQEIQDAVMKVYDETDEVVPDKNATSEDSEEA
3FYM Chain:A ((2-83))
KTVGEALKGRRERLGMTLTELEQRTGIK------REMLVHIENNE--FDQLPNKNYSEGFIRKYASVVNIEPNQLIQAH--------------QDEIPSNQAEW
General information:
TITO was launched using:
RESULT:
Template:
3FYM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1872 for 519 contacts (-3.6/contact) +
2D Compatibility (PS) -8135 + (NN) -1803 + (LL) 1700
1D Compatibility (HY) -400 + (ID) 950
Total energy: -11460.0 ( -22.08 by residue)
QMean score : 0.116
(partial model without unconserved sides chains):
PDB file :
Tito_3FYM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FYM-query.scw
PDB file :
Tito_Scwrl_3FYM.pdb
: