Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAIAVLLNRMFRMEHNPLFEYIYQQKEDIDACYFIIPEEDMS---------SA-SDLKAQFYRGTLQRFYQSLHAEKLTPYVMSYDD---IISFCKENNISEVVIAGDIMSYHLEEYDILHQRSLFNEARIAVTLIRGNHYFKASKTMNQ-QGEPYKVFTSFYRKWRPYLRHRDV-------YHYDL--KSFEDFVIASPD--D-------LVFDDIAFGSSQVIEQNKWQHFLDQD--IQNYESGRDYLP---EVLTSQLSVALAYGLLDIIEIFNDLLARYD---EDEANHEAFIRELIFREFYYVLMTQYPETSYQAFKPKYRQIKWSQNEANFNAWCEGQTGFPIIDAAIMELTQTGFMHNRMRMVVSQFLTK-DLFIDWTWGEKFFRKHLIDYDAASNIHGWQWSASTGTDAVPYFRMFNPIRQSERFDAKALYIKTYLPIFNQIDAKYLHDTQRNESNLF-EQGIELGSHYPRQMVDHQEKRTQVLATFKALD |
| 3FY4 Chain:A ((5-491)) | SGSLIWFRKGLRVHDNPALEYASKGSEFMYPVFVIDPHYMESDPSAFSPGSSRAGVNRIRFLLESLKDLDSSLKKLGSRLLVFKGEPGEVLVRCLQEWKVKRLCFEYDTDPYYQA--LDVKVKDYASSTGVEVFSPVSHTLFNPAHIIEKNGGKPPLSYQSFLKVAGEPSCAKSELVMSYSSLPPIGDIGNLGISEVPSLEELGYKDDEQADWTPFR---GGESEALKRLTKSISDKAWVANFEKPKGDPSAFLKPATTVMSPYLKFGCLSSRYFYQCLQNIYKDVKKHTSPPVSLLGQLLWREFFYTTAFGTPNFDKMKGNRICKQIPWNEDHAMLAAWRDGKTGYPWIDAIMVQLLKWGWMHHLARHCVACFLTRGDLFIHWEQGRDVFERLLIDSDWAINNGNWMWLSCSSFF-YQFNRIYSPISFGKKYDPDGKYIRHFLPVLKDMPKQYIYEPWTAPLSVQTKANCIVGKDYPKPMVLHDSASKECKR------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3FY4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -202195 for 3781 contacts (-53.5/contact) +
2D Compatibility (PS) -46387 + (NN) -12207 + (LL) 936
1D Compatibility (HY) -21600 + (ID) 4600
Total energy: -286053.0 ( -75.66 by residue)
QMean score : 0.443
|
|
|