Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKDLLQAQQKLIPDLIDKMYKRFSILTTISKNQPVGRRSLSEHMDMTERVLRSETDMLKKQDLIKVKPTGMEITAEGEQLISQLKGYFDIYADDNRLSEGIKNKFQIKEVHVVPGDADNSQSVKTE-LGRQAGQLLEGILQEDAIVAVTGGSTMACVSEAIHLLPY-NVFFVPARGGLGE-NVVFQANTIAASMAQQAGGYYTTMYVPDNVSETTYNTLL----LEPSVINTL-DKIKQANVILHGIGD-ALKMAHRRQS--PEKVIEQLQHHQAVGEAFGYYFDTQGQIVH---KVKTIGLQLEDLESKDFIFAVAGGKSKGEAIKAYLTIAPKNTV--LITDEAAAKIILE |
| 2GNP Chain:A ((11-261)) | -----------------------------------------------------------------------------------------------KLENYVKEKYSLESLEIIPNEFDDTPTILSERISQVAAGVLRNLIDDNMKIGFSWGKSLSNLVDLIHSKSVRNVHFYPLAGGPSHIHAKYHVNTLIYEMSRKFHGECTFM----NATIVQENKLLADGILQSRYFENLKNSWKDLDIAVVGIGDFSNKGKHQWLDMLTEDDFKELTKVKTVGEICCRFFDSKGKEVYENLQERTIAISLEDLKNIPQSLAVAYGDTKVSSI---LSVLRANLVNHLITDKNTILKVLE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2GNP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -142058 for 1879 contacts (-75.6/contact) +
2D Compatibility (PS) -25404 + (NN) -10045 + (LL) 7572
1D Compatibility (HY) -14800 + (ID) 3300
Total energy: -188035.0 ( -100.07 by residue)
QMean score : 0.526
|
|
|