Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIVNKVIIVEGKSDKKRVQQVIA---EPVNIICTHGTMSIDKLDDMIESLY--DKQVFVLADSDDEGDRIRNWFKRYLSESEHIFIDKTYCQVANCPKQYLAHVLSKHGFTCKKETPLLPNINNERLVLVNE
2Q2E Chain:A ((195-275))
---ASMIIAIETGGMYARLMENGFDEAYNAILVHLKGQPARSTRRIIKRMNEELGIPVAVFTDGDPWSYRIYASVA---------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2Q2E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26993 for 412 contacts (-65.5/contact) +
2D Compatibility (PS) -7548 + (NN) -1142 + (LL) 4580
1D Compatibility (HY) 800 + (ID) 500
Total energy: -30803.0 ( -74.76 by residue)
QMean score : 0.536
(partial model without unconserved sides chains):
PDB file :
Tito_2Q2E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Q2E-query.scw
PDB file :
Tito_Scwrl_2Q2E.pdb
: