Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MEFREQVLNLLAEVAENDIVKENPDVEIFEEGIIDSFQTVGLLLEIQNKLDIEVSIMDFDRDEWATPNKIVEALEELR
1HQB Chain:A ((2-81))
ADEAIKNGVLDILADLTGSDDVKKNLDLNLFETGLLDSMGTVQLLLELQSQFGVDAPVSEFDRKEWDTPNKIIAKVEQAQ
General information:
TITO was launched using:
RESULT:
Template:
1HQB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48110 for 541 contacts (-88.9/contact) +
2D Compatibility (PS) -8109 + (NN) -3923 + (LL) 0
1D Compatibility (HY) -8400 + (ID) 1600
Total energy: -70142.0 ( -129.65 by residue)
QMean score : 0.560
(partial model without unconserved sides chains):
PDB file :
Tito_1HQB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HQB-query.scw
PDB file :
Tito_Scwrl_1HQB.pdb
: